BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012G02SP1|AL426410
(775 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig687 1520 0.0
>3x_Contig687
Length = 2400
Score = 1520 bits (766), Expect = 0.0
Identities = 774/776 (99%), Gaps = 1/776 (0%)
Strand = Plus / Plus
Query: 1 atctaatttgaactccttatcaaaatagaattcaggtatttcttcaaatgccttggcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1054 atctaatttgaactccttatcaaaatagaattcaggtatttcttcaaatgccttggcttt 1113
Query: 61 cgtattttgcaatccaagggcagttttatcatgatcaatagatctcatttgctccattcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1114 cgtattttgcaatccaagggcagttttatcatgatcaatagatctcatttgctccattcg 1173
Query: 121 gttcaactttgatatattatttgtcgattgatacaccctatattcgtctttaatgtcatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1174 gttcaactttgatatattatttgtcgattgatacaccctatattcgtctttaatgtcatc 1233
Query: 181 tctgtattgattaatatccttgtcccatttatccttaatatcgttcttgcttagaactac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1234 tctgtattgattaatatccttgtcccatttatccttaatatcgttcttgcttagaactac 1293
Query: 241 agggggaatatcctcggtggttgggtgccgcaaccatcttttaaatctggtgttcatcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1294 agggggaatatcctcggtggttgggtgccgcaaccatcttttaaatctggtgttcatcac 1353
Query: 301 aatttcatatattgaattatcaaccaacggtgaataatcaagaccgtgtttttgggtatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1354 aatttcatatattgaattatcaaccaacggtgaataatcaagaccgtgtttttgggtatg 1413
Query: 361 catcgttgtagaaaaagaattgaatgtggaatcaaaactactacgcctcatagacatact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1414 catcgttgtagaaaaagaattgaatgtggaatcaaaactactacgcctcatagacatact 1473
Query: 421 gtcccttatttgatccctgtttctagataatacagatagatcatcgttcaacgagctagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1474 gtcccttatttgatccctgtttctagataatacagatagatcatcgttcaacgagctagc 1533
Query: 481 atcatctgaggcatgactgggcaccaatagtggagatcgacttaattgcgtcctactatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1534 atcatctgaggcatgactgggcaccaatagtggagatcgacttaattgcgtcctactatc 1593
Query: 541 aggagttagagatagagctggtgtctcacttcccagtaacctatccggcatagttaactc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1594 aggagttagagatagagctggtgtctcacttcccagtaacctatccggcatagttaactc 1653
Query: 601 gctggtttatagtctgttggaacagctttttctttgctatgcatcttaaaggtgtatgta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1654 gctggtttatagtctgttggaacagctttttctttgctatgcatcttaaaggtgtatgta 1713
Query: 661 tctgtttacaatatgaactttaatcgattttcag-tttttacatattcaatgatacttct 719
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1714 tctgtttacaatatgaactttaatcgattttcagatttttacatattcaatgatacttct 1773
Query: 720 aaaagaaagtgaacatggtagtttgagtatataattdagcgcactctctcaacata 775
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1774 aaaagaaagtgaacatggtagtttgagtatataattaagcgcactctctcaacata 1829
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5938
Number of Sequences: 1807
Number of extensions: 5938
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 775
length of database: 10,358,551
effective HSP length: 16
effective length of query: 759
effective length of database: 10,329,639
effective search space: 7840196001
effective search space used: 7840196001
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)